PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_3DS_BB7306A01.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bZIP
Protein Properties Length: 172aa    MW: 19702.3 Da    PI: 9.7948
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_3DS_BB7306A01.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.29.6e-10239845
                           HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                           rr+++NReAAr+sR+RKka++++Le+   +L++  ++L
  Traes_3DS_BB7306A01.1  2 RRLAQNREAARKSRLRKKAYVQQLENSRLKLTQLEQEL 39
                           8************************9877777766655 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502179.025141IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.53E-7242No hitNo description
PfamPF001707.8E-7239IPR004827Basic-leucine zipper domain
PROSITE patternPS000360217IPR004827Basic-leucine zipper domain
SMARTSM003380.0037258IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.6E-8244No hitNo description
PfamPF141446.7E-3381154IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MRRLAQNREA ARKSRLRKKA YVQQLENSRL KLTQLEQELQ RARQQGIFIS SSADQSHSMS  60
GNGALAFDTE YARWLEEHNR QVNELRAAVN ARAGDTELRS VVEKIMSHYD DIFKQKGNAA  120
KADVFHVLSG MWKTPAERCF LWLGGFRPSE LLKVCNAALC FTCSPSEYQN HL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4243180.0JX424318.1 Triticum monococcum TGA-type basic leucine zipper protein mRNA, complete cds.
GenBankX567820.0X56782.1 T.aestivum 1b-c38 gene for HBP-1b (leucine zipper type transcription factor).
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015621703.11e-103PREDICTED: transcription factor HBP-1b(c38)
RefseqXP_015621704.11e-103PREDICTED: transcription factor HBP-1b(c38)
SwissprotP239231e-111HBP1B_WHEAT; Transcription factor HBP-1b(c38)
TrEMBLW5DJH01e-127W5DJH0_WHEAT; Uncharacterized protein
STRINGLOC_Os01g17260.11e-102(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2953444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.51e-82TGACG motif-binding factor 6
Publications ? help Back to Top
  1. Brenchley R, et al.
    Analysis of the bread wheat genome using whole-genome shotgun sequencing.
    Nature, 2012. 491(7426): p. 705-10
    [PMID:23192148]